WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219998 Gene Name  K02A11.12
Sequence Name  ? K02A11.12 Organism  Caenorhabditis elegans
Automated Description  Is affected by cep-1 based on RNA-seq studies. Biotype  SO:0001267
Genetic Position  :± Length (nt)  ? 155
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219998

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02A11.12 K02A11.12 155   I: 9751182-9751336
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk962858
gk962706
gk963902
gk963849
gk964237
WBVar01432614
WBVar01957574

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00219998 9751182 9751336 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_9751337..9751342   6 I: 9751337-9751342 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. ncRNAs with more than 2 fold difference in expression are considered differentially expressed WBPaper00045380:cep-1(gk138)_upregulated_normal

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00219998 9751182 9751336 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
155

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_9749954..9751181   1228 I: 9749954-9751181 Caenorhabditis elegans