WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C36F7.4a Sequence Name  C36F7.4a
Length (nt)  843   Chromosome Location  I: 9565492-9565577
Chromosome . Primary Identifier  I Chromosome Location . Start  9565492
Chromosome Location . End  9565577
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33980 RIG-5, isoform a 31.4 280 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042084
WBRNAi00003106
WBRNAi00003107
WBRNAi00116866

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C36F7.4a 9565492 9565577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C36F7.4a 9565492 9565577 -1
CDS:C36F7.4a 9566694 9566738 -1
CDS:C36F7.4a 9566917 9567052 -1
CDS:C36F7.4a 9567234 9567385 -1
CDS:C36F7.4a 9568102 9568230 -1
CDS:C36F7.4a 9572150 9572228 -1
CDS:C36F7.4a 9572276 9572416 -1
CDS:C36F7.4a 9572480 9572554 -1

1 Sequence

Length
843

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C36F7.4a.2 C36F7.4a.2 1095   I: 9565394-9574169
Transcript:C36F7.4a.1 C36F7.4a.1 1021   I: 9565394-9574187