WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16A11.3c.1 Sequence Name  F16A11.3c.1
Length (nt)  3141   Chromosome Location  I: 9366554-9389584
Chromosome . Primary Identifier  I Chromosome Location . Start  9366554
Chromosome Location . End  9389584 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16A11.3c F16A11.3c 3141   I: 9366554-9366584

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16A11.3c.1 9366554 9389584 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25256   31   I: 9366554-9366584 Caenorhabditis elegans
Exon25262   564   I: 9366823-9367386 Caenorhabditis elegans
Exon25266   174   I: 9367541-9367714 Caenorhabditis elegans
Exon25270   262   I: 9367845-9368106 Caenorhabditis elegans
Exon25273   378   I: 9368919-9369296 Caenorhabditis elegans
Exon25278   155   I: 9369867-9370021 Caenorhabditis elegans
Exon25282   180   I: 9370463-9370642 Caenorhabditis elegans
Exon25286   443   I: 9370777-9371219 Caenorhabditis elegans
Exon25290   69   I: 9371335-9371403 Caenorhabditis elegans
Exon25294   60   I: 9371456-9371515 Caenorhabditis elegans
Exon25298   114   I: 9371954-9372067 Caenorhabditis elegans
Exon25321   159   I: 9382472-9382630 Caenorhabditis elegans
Exon25327   218   I: 9388005-9388222 Caenorhabditis elegans
Exon25331   134   I: 9388666-9388799 Caenorhabditis elegans
Exon25335   178   I: 9388896-9389073 Caenorhabditis elegans
Exon25337   22   I: 9389563-9389584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16A11.3c.1 9366554 9389584 -1

1 Sequence

Length
3141

1 Sequence Ontology Term

Identifier Name Description
transcript