WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16A11.3a.1 Sequence Name  F16A11.3a.1
Length (nt)  5134   Chromosome Location  I: 9364165-9389633
Chromosome . Primary Identifier  I Chromosome Location . Start  9364165
Chromosome Location . End  9389633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16A11.3a F16A11.3a 4473   I: 9364777-9364845

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16A11.3a.1 9364165 9389633 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25232   681   I: 9364165-9364845 Caenorhabditis elegans
Exon25234   261   I: 9364890-9365150 Caenorhabditis elegans
Exon25237   75   I: 9365206-9365280 Caenorhabditis elegans
Exon25240   286   I: 9365336-9365621 Caenorhabditis elegans
Exon25243   82   I: 9365805-9365886 Caenorhabditis elegans
Exon25246   101   I: 9365933-9366033 Caenorhabditis elegans
Exon25249   306   I: 9366104-9366409 Caenorhabditis elegans
Exon25252   122   I: 9366463-9366584 Caenorhabditis elegans
Exon25257   61   I: 9366644-9366704 Caenorhabditis elegans
Exon25260   564   I: 9366823-9367386 Caenorhabditis elegans
Exon25264   174   I: 9367541-9367714 Caenorhabditis elegans
Exon25268   262   I: 9367845-9368106 Caenorhabditis elegans
Exon25272   378   I: 9368919-9369296 Caenorhabditis elegans
Exon25276   155   I: 9369867-9370021 Caenorhabditis elegans
Exon25280   180   I: 9370463-9370642 Caenorhabditis elegans
Exon25284   443   I: 9370777-9371219 Caenorhabditis elegans
Exon25288   69   I: 9371335-9371403 Caenorhabditis elegans
Exon25292   60   I: 9371456-9371515 Caenorhabditis elegans
Exon25296   114   I: 9371954-9372067 Caenorhabditis elegans
Exon25319   159   I: 9382472-9382630 Caenorhabditis elegans
Exon25325   218   I: 9388005-9388222 Caenorhabditis elegans
Exon25329   134   I: 9388666-9388799 Caenorhabditis elegans
Exon25333   178   I: 9388896-9389073 Caenorhabditis elegans
Exon25338   71   I: 9389563-9389633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16A11.3a.1 9364165 9389633 -1

1 Sequence

Length
5134

1 Sequence Ontology Term

Identifier Name Description
transcript