WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16A11.3b.1 Sequence Name  F16A11.3b.1
Length (nt)  4828   Chromosome Location  I: 9364099-9389639
Chromosome . Primary Identifier  I Chromosome Location . Start  9364099
Chromosome Location . End  9389639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16A11.3b F16A11.3b 4095   I: 9364777-9364845

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16A11.3b.1 9364099 9389639 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25231   747   I: 9364099-9364845 Caenorhabditis elegans
Exon25235   261   I: 9364890-9365150 Caenorhabditis elegans
Exon25238   75   I: 9365206-9365280 Caenorhabditis elegans
Exon25241   286   I: 9365336-9365621 Caenorhabditis elegans
Exon25244   82   I: 9365805-9365886 Caenorhabditis elegans
Exon25247   101   I: 9365933-9366033 Caenorhabditis elegans
Exon25250   306   I: 9366104-9366409 Caenorhabditis elegans
Exon25253   122   I: 9366463-9366584 Caenorhabditis elegans
Exon25258   61   I: 9366644-9366704 Caenorhabditis elegans
Exon25261   564   I: 9366823-9367386 Caenorhabditis elegans
Exon25265   174   I: 9367541-9367714 Caenorhabditis elegans
Exon25269   262   I: 9367845-9368106 Caenorhabditis elegans
Exon25277   155   I: 9369867-9370021 Caenorhabditis elegans
Exon25281   180   I: 9370463-9370642 Caenorhabditis elegans
Exon25285   443   I: 9370777-9371219 Caenorhabditis elegans
Exon25289   69   I: 9371335-9371403 Caenorhabditis elegans
Exon25293   60   I: 9371456-9371515 Caenorhabditis elegans
Exon25297   114   I: 9371954-9372067 Caenorhabditis elegans
Exon25320   159   I: 9382472-9382630 Caenorhabditis elegans
Exon25326   218   I: 9388005-9388222 Caenorhabditis elegans
Exon25330   134   I: 9388666-9388799 Caenorhabditis elegans
Exon25334   178   I: 9388896-9389073 Caenorhabditis elegans
Exon25340   77   I: 9389563-9389639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16A11.3b.1 9364099 9389639 -1

1 Sequence

Length
4828

1 Sequence Ontology Term

Identifier Name Description
transcript