WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12C8.3a.1 Sequence Name  C12C8.3a.1
Length (nt)  4804   Chromosome Location  I: 9334800-9342496
Chromosome . Primary Identifier  I Chromosome Location . Start  9334800
Chromosome Location . End  9342496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12C8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12C8.3a C12C8.3a 3444   I: 9335965-9336126

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3a.1 9334800 9342496 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25102   1327   I: 9334800-9336126 Caenorhabditis elegans
Exon25105   271   I: 9336173-9336443 Caenorhabditis elegans
Exon25109   678   I: 9336491-9337168 Caenorhabditis elegans
Exon25113   213   I: 9337214-9337426 Caenorhabditis elegans
Exon25117   372   I: 9337787-9338158 Caenorhabditis elegans
Exon25121   80   I: 9338208-9338287 Caenorhabditis elegans
Exon25127   314   I: 9338503-9338816 Caenorhabditis elegans
Exon25129   97   I: 9338856-9338952 Caenorhabditis elegans
Exon25133   124   I: 9340020-9340143 Caenorhabditis elegans
Exon25137   272   I: 9340198-9340469 Caenorhabditis elegans
Exon25141   272   I: 9340857-9341128 Caenorhabditis elegans
Exon25145   141   I: 9341176-9341316 Caenorhabditis elegans
Exon25149   50   I: 9341360-9341409 Caenorhabditis elegans
Exon25153   262   I: 9341453-9341714 Caenorhabditis elegans
Exon25157   152   I: 9341762-9341913 Caenorhabditis elegans
Exon25161   179   I: 9342318-9342496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3a.1 9334800 9342496 -1

1 Sequence

Length
4804

1 Sequence Ontology Term

Identifier Name Description
transcript