WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B6.2a.1 Sequence Name  F53B6.2a.1
Length (nt)  3351   Chromosome Location  I: 8931033-8942287
Chromosome . Primary Identifier  I Chromosome Location . Start  8931033
Chromosome Location . End  8942287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009958 madd-4 F53B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B6.2a F53B6.2a 3138   I: 8931163-8931232

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53B6.2a.1 8931033 8942287 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23742   200   I: 8931033-8931232 Caenorhabditis elegans
Exon23745   55   I: 8931386-8931440 Caenorhabditis elegans
Exon23748   225   I: 8931964-8932188 Caenorhabditis elegans
Exon23751   295   I: 8932261-8932555 Caenorhabditis elegans
Exon23754   258   I: 8932784-8933041 Caenorhabditis elegans
Exon23757   501   I: 8933097-8933597 Caenorhabditis elegans
Exon23760   470   I: 8933711-8934180 Caenorhabditis elegans
Exon23763   131   I: 8934439-8934569 Caenorhabditis elegans
Exon23766   81   I: 8934997-8935077 Caenorhabditis elegans
Exon23770   200   I: 8939469-8939668 Caenorhabditis elegans
Exon23772   139   I: 8940139-8940277 Caenorhabditis elegans
Exon23774   6   I: 8940562-8940567 Caenorhabditis elegans
Exon23775   202   I: 8940824-8941025 Caenorhabditis elegans
Exon23777   112   I: 8941076-8941187 Caenorhabditis elegans
Exon23779   117   I: 8941234-8941350 Caenorhabditis elegans
Exon23781   162   I: 8941887-8942048 Caenorhabditis elegans
Exon23783   197   I: 8942091-8942287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53B6.2a.1 8931033 8942287 -1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript