WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08G11.1a Sequence Name  T08G11.1a
Length (nt)  9639   Chromosome Location  I: 8905866-8905985
Chromosome . Primary Identifier  I Chromosome Location . Start  8905866
Chromosome Location . End  8905985
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13443 VPS-13A, isoform a 359.3 3212 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00000620
WBRNAi00052879
WBRNAi00004172
WBRNAi00113436
WBRNAi00116980
WBRNAi00118475
WBRNAi00118408
WBRNAi00118354

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08G11.1a 8905866 8905985 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011629 vps-13A T08G11.1 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08G11.1a 8905866 8905985 -1
CDS:T08G11.1a 8906035 8906748 -1
CDS:T08G11.1a 8906795 8907274 -1
CDS:T08G11.1a 8907319 8907494 -1
CDS:T08G11.1a 8907542 8907611 -1
CDS:T08G11.1a 8907699 8908502 -1
CDS:T08G11.1a 8908551 8908673 -1
CDS:T08G11.1a 8908717 8908863 -1
CDS:T08G11.1a 8908909 8909016 -1
CDS:T08G11.1a 8909064 8909147 -1
CDS:T08G11.1a 8909273 8909353 -1
CDS:T08G11.1a 8909585 8909686 -1
CDS:T08G11.1a 8909734 8910154 -1
CDS:T08G11.1a 8910198 8910904 -1
CDS:T08G11.1a 8910948 8911142 -1
CDS:T08G11.1a 8911188 8913284 -1
CDS:T08G11.1a 8913331 8914244 -1
CDS:T08G11.1a 8914290 8915005 -1
CDS:T08G11.1a 8915049 8916082 -1
CDS:T08G11.1a 8916132 8916230 -1
CDS:T08G11.1a 8916304 8916650 -1
CDS:T08G11.1a 8916705 8916804 -1

1 Sequence

Length
9639

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08G11.1a.1 T08G11.1a.1 9855   I: 8905651-8916805