WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H2.5.1 Sequence Name  F39H2.5.1
Length (nt)  1878   Chromosome Location  I: 8660831-8663104
Chromosome . Primary Identifier  I Chromosome Location . Start  8660831
Chromosome Location . End  8663104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045237 mrt-1 F39H2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H2.5 F39H2.5 1827   I: 8660837-8661015

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39H2.5.1 8660831 8663104 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22727   185   I: 8660831-8661015 Caenorhabditis elegans
Exon22728   169   I: 8661063-8661231 Caenorhabditis elegans
Exon22729   338   I: 8661282-8661619 Caenorhabditis elegans
Exon22730   132   I: 8661669-8661800 Caenorhabditis elegans
Exon22731   336   I: 8661850-8662185 Caenorhabditis elegans
Exon22732   219   I: 8662241-8662459 Caenorhabditis elegans
Exon22733   255   I: 8662506-8662760 Caenorhabditis elegans
Exon22734   244   I: 8662861-8663104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39H2.5.1 8660831 8663104 1

1 Sequence

Length
1878

1 Sequence Ontology Term

Identifier Name Description
transcript