WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H2.2a.1 Sequence Name  F39H2.2a.1
Length (nt)  1362   Chromosome Location  I: 8646451-8651667
Chromosome . Primary Identifier  I Chromosome Location . Start  8646451
Chromosome Location . End  8651667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000890 sig-7 F39H2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H2.2a F39H2.2a 1284   I: 8646451-8646653

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39H2.2a.1 8646451 8651667 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22708   203   I: 8646451-8646653 Caenorhabditis elegans
Exon22711   261   I: 8649761-8650021 Caenorhabditis elegans
Exon22712   100   I: 8650535-8650634 Caenorhabditis elegans
Exon22714   117   I: 8650685-8650801 Caenorhabditis elegans
Exon22716   132   I: 8650845-8650976 Caenorhabditis elegans
Exon22718   172   I: 8651025-8651196 Caenorhabditis elegans
Exon22720   163   I: 8651242-8651404 Caenorhabditis elegans
Exon22722   214   I: 8651454-8651667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39H2.2a.1 8646451 8651667 1

1 Sequence

Length
1362

1 Sequence Ontology Term

Identifier Name Description
transcript