WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:VF39H2L.1.1 Sequence Name  VF39H2L.1.1
Length (nt)  978   Chromosome Location  I: 8644460-8646304
Chromosome . Primary Identifier  I Chromosome Location . Start  8644460
Chromosome Location . End  8646304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
VF39H2L.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012150 syx-17 VF39H2L.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:VF39H2L.1 VF39H2L.1 753   I: 8644499-8644600

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:VF39H2L.1.1 8644460 8646304 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22702   141   I: 8644460-8644600 Caenorhabditis elegans
Exon22703   116   I: 8644700-8644815 Caenorhabditis elegans
Exon22704   120   I: 8644864-8644983 Caenorhabditis elegans
Exon22705   256   I: 8645028-8645283 Caenorhabditis elegans
Exon22706   112   I: 8645886-8645997 Caenorhabditis elegans
Exon22707   233   I: 8646072-8646304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:VF39H2L.1.1 8644460 8646304 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript