WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D11.4.1 Sequence Name  R05D11.4.1
Length (nt)  1888   Chromosome Location  I: 8598658-8600875
Chromosome . Primary Identifier  I Chromosome Location . Start  8598658
Chromosome Location . End  8600875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011032 ddx-52 R05D11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D11.4 R05D11.4 1746   I: 8598658-8598859

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R05D11.4.1 8598658 8600875 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22533   202   I: 8598658-8598859 Caenorhabditis elegans
Exon22534   110   I: 8598911-8599020 Caenorhabditis elegans
Exon22535   205   I: 8599069-8599273 Caenorhabditis elegans
Exon22536   140   I: 8599319-8599458 Caenorhabditis elegans
Exon22537   155   I: 8599505-8599659 Caenorhabditis elegans
Exon22538   159   I: 8599705-8599863 Caenorhabditis elegans
Exon22539   567   I: 8599913-8600479 Caenorhabditis elegans
Exon22540   350   I: 8600526-8600875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R05D11.4.1 8598658 8600875 1

1 Sequence

Length
1888

1 Sequence Ontology Term

Identifier Name Description
transcript