WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.4a.1 Sequence Name  F02E9.4a.1
Length (nt)  4720   Chromosome Location  I: 8416816-8425051
Chromosome . Primary Identifier  I Chromosome Location . Start  8416816
Chromosome Location . End  8425051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004117 sin-3 F02E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.4a F02E9.4a 4518   I: 8416832-8417506

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F02E9.4a.1 8416816 8425051 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21907   691   I: 8416816-8417506 Caenorhabditis elegans
Exon21909   287   I: 8417895-8418181 Caenorhabditis elegans
Exon21911   157   I: 8418451-8418607 Caenorhabditis elegans
Exon21913   303   I: 8418720-8419022 Caenorhabditis elegans
Exon21915   435   I: 8419422-8419856 Caenorhabditis elegans
Exon21917   135   I: 8420348-8420482 Caenorhabditis elegans
Exon21919   99   I: 8420529-8420627 Caenorhabditis elegans
Exon21921   393   I: 8420954-8421346 Caenorhabditis elegans
Exon21923   120   I: 8421397-8421516 Caenorhabditis elegans
Exon21925   101   I: 8421585-8421685 Caenorhabditis elegans
Exon21927   189   I: 8421879-8422067 Caenorhabditis elegans
Exon21929   144   I: 8422116-8422259 Caenorhabditis elegans
Exon21931   150   I: 8422658-8422807 Caenorhabditis elegans
Exon21934   87   I: 8422860-8422946 Caenorhabditis elegans
Exon21935   262   I: 8422996-8423257 Caenorhabditis elegans
Exon21937   114   I: 8423540-8423653 Caenorhabditis elegans
Exon21939   399   I: 8423702-8424100 Caenorhabditis elegans
Exon21941   129   I: 8424159-8424287 Caenorhabditis elegans
Exon21943   222   I: 8424485-8424706 Caenorhabditis elegans
Exon21946   303   I: 8424749-8425051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F02E9.4a.1 8416816 8425051 1

1 Sequence

Length
4720

1 Sequence Ontology Term

Identifier Name Description
transcript