WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G4.1a.1 Sequence Name  C54G4.1a.1
Length (nt)  2881   Chromosome Location  I: 8014412-8019577
Chromosome . Primary Identifier  I Chromosome Location . Start  8014412
Chromosome Location . End  8019577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008311 rskn-2 C54G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G4.1a C54G4.1a 2319   I: 8014468-8014632

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G4.1a.1 8014412 8019577 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20732   221   I: 8014412-8014632 Caenorhabditis elegans
Exon20733   398   I: 8014903-8015300 Caenorhabditis elegans
Exon20736   147   I: 8015681-8015827 Caenorhabditis elegans
Exon20739   307   I: 8015872-8016178 Caenorhabditis elegans
Exon20742   173   I: 8016284-8016456 Caenorhabditis elegans
Exon20745   232   I: 8016581-8016812 Caenorhabditis elegans
Exon20748   90   I: 8016872-8016961 Caenorhabditis elegans
Exon20752   122   I: 8017134-8017255 Caenorhabditis elegans
Exon20754   109   I: 8017784-8017892 Caenorhabditis elegans
Exon20757   277   I: 8018139-8018415 Caenorhabditis elegans
Exon20761   148   I: 8018470-8018617 Caenorhabditis elegans
Exon20766   657   I: 8018921-8019577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G4.1a.1 8014412 8019577 1

1 Sequence

Length
2881

1 Sequence Ontology Term

Identifier Name Description
transcript