WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C1.7.1 Sequence Name  T22C1.7.1
Length (nt)  3058   Chromosome Location  I: 7946179-7951593
Chromosome . Primary Identifier  I Chromosome Location . Start  7946179
Chromosome Location . End  7951593 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002179 jph-1 T22C1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C1.7 T22C1.7 2244   I: 7946944-7947057

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T22C1.7.1 7946179 7951593 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20556   879   I: 7946179-7947057 Caenorhabditis elegans
Exon20557   129   I: 7947433-7947561 Caenorhabditis elegans
Exon20558   174   I: 7948022-7948195 Caenorhabditis elegans
Exon20559   109   I: 7948388-7948496 Caenorhabditis elegans
Exon20560   329   I: 7948550-7948878 Caenorhabditis elegans
Exon20561   475   I: 7948977-7949451 Caenorhabditis elegans
Exon20562   361   I: 7949511-7949871 Caenorhabditis elegans
Exon20563   174   I: 7950318-7950491 Caenorhabditis elegans
Exon20564   131   I: 7950540-7950670 Caenorhabditis elegans
Exon20565   297   I: 7951297-7951593 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T22C1.7.1 7946179 7951593 -1

1 Sequence

Length
3058

1 Sequence Ontology Term

Identifier Name Description
transcript