WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F27D4.2a Sequence Name  F27D4.2a
Length (nt)  882   Chromosome Location  I: 7705212-7705466
Chromosome . Primary Identifier  I Chromosome Location . Start  7705212
Chromosome Location . End  7705466
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41228 LSY-22, isoform a 31.5 293 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00025279
WBRNAi00000038
WBRNAi00045739
WBRNAi00025280
WBRNAi00082984
WBRNAi00081410
WBRNAi00031495
WBRNAi00087200
WBRNAi00082983
WBRNAi00082982
WBRNAi00082985

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F27D4.2a 7705212 7705466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009188 lsy-22 F27D4.2 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F27D4.2a 7705212 7705466 -1
CDS:F27D4.2a 7705967 7706593 -1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F27D4.2a.4 F27D4.2a.4 1798   I: 7704530-7707056
Transcript:F27D4.2a.2 F27D4.2a.2 1989   I: 7704530-7718639
Transcript:F27D4.2a.3 F27D4.2a.3 1816   I: 7704564-7718497
Transcript:F27D4.2a.1 F27D4.2a.1 1758   I: 7704566-7707049