WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A3.8a.1 Sequence Name  F26A3.8a.1
Length (nt)  5030   Chromosome Location  I: 7643426-7649777
Chromosome . Primary Identifier  I Chromosome Location . Start  7643426
Chromosome Location . End  7649777 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004508 rrf-1 F26A3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.8a F26A3.8a 4806   I: 7643640-7643800

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F26A3.8a.1 7643426 7649777 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19704   375   I: 7643426-7643800 Caenorhabditis elegans
Exon19707   120   I: 7643848-7643967 Caenorhabditis elegans
Exon19711   250   I: 7644018-7644267 Caenorhabditis elegans
Exon19713   527   I: 7644572-7645098 Caenorhabditis elegans
Exon19715   136   I: 7645151-7645286 Caenorhabditis elegans
Exon19717   180   I: 7645339-7645518 Caenorhabditis elegans
Exon19719   272   I: 7645564-7645835 Caenorhabditis elegans
Exon19721   202   I: 7645881-7646082 Caenorhabditis elegans
Exon19723   458   I: 7646138-7646595 Caenorhabditis elegans
Exon19725   112   I: 7646643-7646754 Caenorhabditis elegans
Exon19727   363   I: 7646805-7647167 Caenorhabditis elegans
Exon19729   180   I: 7647212-7647391 Caenorhabditis elegans
Exon19731   543   I: 7647469-7648011 Caenorhabditis elegans
Exon19733   267   I: 7648060-7648326 Caenorhabditis elegans
Exon19735   180   I: 7648388-7648567 Caenorhabditis elegans
Exon19737   144   I: 7648646-7648789 Caenorhabditis elegans
Exon19739   123   I: 7648838-7648960 Caenorhabditis elegans
Exon19741   321   I: 7649036-7649356 Caenorhabditis elegans
Exon19744   159   I: 7649407-7649565 Caenorhabditis elegans
Exon19745   118   I: 7649660-7649777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F26A3.8a.1 7643426 7649777 -1

1 Sequence

Length
5030

1 Sequence Ontology Term

Identifier Name Description
transcript