WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D6.5a.2 Sequence Name  F22D6.5a.2
Length (nt)  2641   Chromosome Location  I: 7091307-7094723
Chromosome . Primary Identifier  I Chromosome Location . Start  7091307
Chromosome Location . End  7094723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D6.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004186 prpf-4 F22D6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D6.5a F22D6.5a 2328   I: 7091461-7091571

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F22D6.5a.2 7091307 7094723 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17976   265   I: 7091307-7091571 Caenorhabditis elegans
Exon17982   90   I: 7091783-7091872 Caenorhabditis elegans
Exon17985   245   I: 7091920-7092164 Caenorhabditis elegans
Exon17989   552   I: 7092215-7092766 Caenorhabditis elegans
Exon17993   421   I: 7092851-7093271 Caenorhabditis elegans
Exon17997   138   I: 7093322-7093459 Caenorhabditis elegans
Exon18001   644   I: 7093698-7094341 Caenorhabditis elegans
Exon18005   153   I: 7094385-7094537 Caenorhabditis elegans
Exon18009   133   I: 7094591-7094723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F22D6.5a.2 7091307 7094723 -1

1 Sequence

Length
2641

1 Sequence Ontology Term

Identifier Name Description
transcript