WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06O01.3a.1 Sequence Name  H06O01.3a.1
Length (nt)  1563   Chromosome Location  I: 7005443-7009200
Chromosome . Primary Identifier  I Chromosome Location . Start  7005443
Chromosome Location . End  7009200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06O01.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010370 ctg-1 H06O01.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06O01.3a H06O01.3a 1152   I: 7005720-7005781

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H06O01.3a.1 7005443 7009200 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17762   339   I: 7005443-7005781 Caenorhabditis elegans
Exon17763   163   I: 7006830-7006992 Caenorhabditis elegans
Exon17764   186   I: 7007248-7007433 Caenorhabditis elegans
Exon17766   158   I: 7007715-7007872 Caenorhabditis elegans
Exon17769   88   I: 7007916-7008003 Caenorhabditis elegans
Exon17772   248   I: 7008244-7008491 Caenorhabditis elegans
Exon17775   167   I: 7008774-7008940 Caenorhabditis elegans
Exon17780   214   I: 7008987-7009200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H06O01.3a.1 7005443 7009200 1

1 Sequence

Length
1563

1 Sequence Ontology Term

Identifier Name Description
transcript