WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B6.8.1 Sequence Name  C48B6.8.1
Length (nt)  2303   Chromosome Location  I: 6917700-6922973
Chromosome . Primary Identifier  I Chromosome Location . Start  6917700
Chromosome Location . End  6922973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016744 bbs-9 C48B6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B6.8 C48B6.8 2235   I: 6917750-6917896

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48B6.8.1 6917700 6922973 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17567   197   I: 6917700-6917896 Caenorhabditis elegans
Exon17568   89   I: 6918242-6918330 Caenorhabditis elegans
Exon17569   67   I: 6918379-6918445 Caenorhabditis elegans
Exon17570   153   I: 6918495-6918647 Caenorhabditis elegans
Exon17571   152   I: 6918704-6918855 Caenorhabditis elegans
Exon17572   87   I: 6919038-6919124 Caenorhabditis elegans
Exon17573   132   I: 6919405-6919536 Caenorhabditis elegans
Exon17574   99   I: 6919589-6919687 Caenorhabditis elegans
Exon17575   148   I: 6919968-6920115 Caenorhabditis elegans
Exon17576   159   I: 6920157-6920315 Caenorhabditis elegans
Exon17577   88   I: 6920704-6920791 Caenorhabditis elegans
Exon17578   130   I: 6920841-6920970 Caenorhabditis elegans
Exon17579   187   I: 6921021-6921207 Caenorhabditis elegans
Exon17580   308   I: 6921381-6921688 Caenorhabditis elegans
Exon17581   133   I: 6922153-6922285 Caenorhabditis elegans
Exon17582   68   I: 6922332-6922399 Caenorhabditis elegans
Exon17583   106   I: 6922868-6922973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48B6.8.1 6917700 6922973 -1

1 Sequence

Length
2303

1 Sequence Ontology Term

Identifier Name Description
transcript