WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B6.6a.1 Sequence Name  C48B6.6a.1
Length (nt)  7603   Chromosome Location  I: 6900943-6913579
Chromosome . Primary Identifier  I Chromosome Location . Start  6900943
Chromosome Location . End  6913579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004879 smg-1 C48B6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B6.6a C48B6.6a 6969   I: 6901549-6901626

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B6.6a.1 6900943 6913579 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

42 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17475   684   I: 6900943-6901626 Caenorhabditis elegans
Exon17477   134   I: 6901706-6901839 Caenorhabditis elegans
Exon17479   98   I: 6901884-6901981 Caenorhabditis elegans
Exon17481   81   I: 6902055-6902135 Caenorhabditis elegans
Exon17483   161   I: 6902256-6902416 Caenorhabditis elegans
Exon17485   88   I: 6902492-6902579 Caenorhabditis elegans
Exon17487   353   I: 6902657-6903009 Caenorhabditis elegans
Exon17489   297   I: 6903114-6903410 Caenorhabditis elegans
Exon17491   105   I: 6903459-6903563 Caenorhabditis elegans
Exon17493   238   I: 6903650-6903887 Caenorhabditis elegans
Exon17495   149   I: 6903988-6904136 Caenorhabditis elegans
Exon17497   84   I: 6904182-6904265 Caenorhabditis elegans
Exon17499   171   I: 6904508-6904678 Caenorhabditis elegans
Exon17501   285   I: 6904723-6905007 Caenorhabditis elegans
Exon17503   179   I: 6905054-6905232 Caenorhabditis elegans
Exon17505   121   I: 6905781-6905901 Caenorhabditis elegans
Exon17507   145   I: 6905955-6906099 Caenorhabditis elegans
Exon17509   296   I: 6906145-6906440 Caenorhabditis elegans
Exon17511   146   I: 6906544-6906689 Caenorhabditis elegans
Exon17513   285   I: 6906736-6907020 Caenorhabditis elegans
Exon17515   266   I: 6907116-6907381 Caenorhabditis elegans
Exon17517   126   I: 6907588-6907713 Caenorhabditis elegans
Exon17519   110   I: 6907786-6907895 Caenorhabditis elegans
Exon17521   88   I: 6907943-6908030 Caenorhabditis elegans
Exon17523   230   I: 6908081-6908310 Caenorhabditis elegans
Exon17525   108   I: 6908392-6908499 Caenorhabditis elegans
Exon17527   224   I: 6908541-6908764 Caenorhabditis elegans
Exon17529   203   I: 6908839-6909041 Caenorhabditis elegans
Exon17531   135   I: 6909087-6909221 Caenorhabditis elegans
Exon17533   153   I: 6909917-6910069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B6.6a.1 6900943 6913579 -1

1 Sequence

Length
7603

1 Sequence Ontology Term

Identifier Name Description
transcript