WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A5.8d.1 Sequence Name  K06A5.8d.1
Length (nt)  3760   Chromosome Location  I: 6473860-6488977
Chromosome . Primary Identifier  I Chromosome Location . Start  6473860
Chromosome Location . End  6488977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019434 nmtn-1 K06A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A5.8d K06A5.8d 1680   I: 6477369-6477526

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K06A5.8d.1 6473860 6488977 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16265   653   I: 6473860-6474512 Caenorhabditis elegans
Exon16291   119   I: 6476751-6476869 Caenorhabditis elegans
Exon16297   609   I: 6476918-6477526 Caenorhabditis elegans
Exon16312   171   I: 6478036-6478206 Caenorhabditis elegans
Exon16317   107   I: 6478254-6478360 Caenorhabditis elegans
Exon16322   69   I: 6478695-6478763 Caenorhabditis elegans
Exon16327   123   I: 6478811-6478933 Caenorhabditis elegans
Exon16332   164   I: 6478983-6479146 Caenorhabditis elegans
Exon16337   146   I: 6479702-6479847 Caenorhabditis elegans
Exon16365   128   I: 6485928-6486055 Caenorhabditis elegans
Exon16370   105   I: 6486215-6486319 Caenorhabditis elegans
Exon16375   438   I: 6486365-6486802 Caenorhabditis elegans
Exon16380   179   I: 6487015-6487193 Caenorhabditis elegans
Exon16385   147   I: 6487635-6487781 Caenorhabditis elegans
Exon16390   156   I: 6487831-6487986 Caenorhabditis elegans
Exon16395   88   I: 6488038-6488125 Caenorhabditis elegans
Exon16400   155   I: 6488257-6488411 Caenorhabditis elegans
Exon16405   203   I: 6488775-6488977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K06A5.8d.1 6473860 6488977 -1

1 Sequence

Length
3760

1 Sequence Ontology Term

Identifier Name Description
transcript