WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48E7.5.1 Sequence Name  C48E7.5.1
Length (nt)  1633   Chromosome Location  I: 6250475-6252876
Chromosome . Primary Identifier  I Chromosome Location . Start  6250475
Chromosome Location . End  6252876 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000583 cof-2 C48E7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48E7.5 C48E7.5 1461   I: 6250571-6250647

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48E7.5.1 6250475 6252876 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15537   173   I: 6250475-6250647 Caenorhabditis elegans
Exon15538   397   I: 6250707-6251103 Caenorhabditis elegans
Exon15539   93   I: 6251260-6251352 Caenorhabditis elegans
Exon15540   124   I: 6251395-6251518 Caenorhabditis elegans
Exon15541   98   I: 6251563-6251660 Caenorhabditis elegans
Exon15542   98   I: 6251919-6252016 Caenorhabditis elegans
Exon15543   160   I: 6252073-6252232 Caenorhabditis elegans
Exon15544   105   I: 6252275-6252379 Caenorhabditis elegans
Exon15545   102   I: 6252428-6252529 Caenorhabditis elegans
Exon15546   283   I: 6252594-6252876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48E7.5.1 6250475 6252876 1

1 Sequence

Length
1633

1 Sequence Ontology Term

Identifier Name Description
transcript