WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5a.1 Sequence Name  T08B2.5a.1
Length (nt)  2863   Chromosome Location  I: 6215775-6219909
Chromosome . Primary Identifier  I Chromosome Location . Start  6215775
Chromosome Location . End  6219909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5a T08B2.5a 2775   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T08B2.5a.1 6215775 6219909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15376   73   I: 6215775-6215847 Caenorhabditis elegans
Exon15378   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15386   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15395   233   I: 6216359-6216591 Caenorhabditis elegans
Exon15399   116   I: 6216678-6216793 Caenorhabditis elegans
Exon15401   132   I: 6217123-6217254 Caenorhabditis elegans
Exon15405   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15412   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15419   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15426   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15433   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15439   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15446   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15453   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15460   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15467   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15477   215   I: 6219695-6219909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T08B2.5a.1 6215775 6219909 1

1 Sequence

Length
2863

1 Sequence Ontology Term

Identifier Name Description
transcript