WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5b.1 Sequence Name  T08B2.5b.1
Length (nt)  2871   Chromosome Location  I: 6215773-6219912
Chromosome . Primary Identifier  I Chromosome Location . Start  6215773
Chromosome Location . End  6219912 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5b T08B2.5b 2778   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T08B2.5b.1 6215773 6219912 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15374   75   I: 6215773-6215847 Caenorhabditis elegans
Exon15379   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15385   110   I: 6216059-6216168 Caenorhabditis elegans
Exon15396   233   I: 6216359-6216591 Caenorhabditis elegans
Exon15400   116   I: 6216678-6216793 Caenorhabditis elegans
Exon15402   132   I: 6217123-6217254 Caenorhabditis elegans
Exon15406   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15413   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15420   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15427   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15434   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15440   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15447   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15454   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15461   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15468   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15480   218   I: 6219695-6219912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T08B2.5b.1 6215773 6219912 1

1 Sequence

Length
2871

1 Sequence Ontology Term

Identifier Name Description
transcript