WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00305596 Gene Name  T09B4.24
Sequence Name  ? T09B4.24 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  I:±
Length (nt)  ? 1586
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00305596

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09B4.24 T09B4.24 1586   I: 6154074-6155659
 

Other

0 CDSs

0 RNAi Result

23 Allele

Public Name
gk962858
gk962706
gk963902
gk964505
gk312307
gk784087
gk372891
gk758394
gk432587
gk550100
gk858368
gk704642
gk112471
gk112472
gk112473
gk112474
gk112475
gk939866
gk5426
WBVar01641029
WBVar01817501
WBVar01419433
WBVar01641028

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00305596 6154074 6155659 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression after synchronized L4 staged worms were treated with 10 mM caffeine at 25C for 72 hours. DESeq2 WBPaper00067717:caffeine_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00305596 6154074 6155659 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1586

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrI_6153754..6154073   320 I: 6153754-6154073 Caenorhabditis elegans