WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A3.1c.1 Sequence Name  T27A3.1c.1
Length (nt)  2074   Chromosome Location  I: 6123120-6126875
Chromosome . Primary Identifier  I Chromosome Location . Start  6123120
Chromosome Location . End  6126875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020838 trak-1 T27A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A3.1c T27A3.1c 1701   I: 6123150-6123245

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.1c.1 6123120 6126875 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15084   126   I: 6123120-6123245 Caenorhabditis elegans
Exon15088   74   I: 6123413-6123486 Caenorhabditis elegans
Exon15091   126   I: 6123646-6123771 Caenorhabditis elegans
Exon15094   60   I: 6123947-6124006 Caenorhabditis elegans
Exon15097   220   I: 6124338-6124557 Caenorhabditis elegans
Exon15100   172   I: 6124608-6124779 Caenorhabditis elegans
Exon15103   179   I: 6124828-6125006 Caenorhabditis elegans
Exon15106   171   I: 6125053-6125223 Caenorhabditis elegans
Exon15109   121   I: 6125270-6125390 Caenorhabditis elegans
Exon15112   149   I: 6125445-6125593 Caenorhabditis elegans
Exon15116   69   I: 6125651-6125719 Caenorhabditis elegans
Exon15118   141   I: 6125904-6126044 Caenorhabditis elegans
Exon15122   466   I: 6126410-6126875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.1c.1 6123120 6126875 1

1 Sequence

Length
2074

1 Sequence Ontology Term

Identifier Name Description
transcript