WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A3.2a.1 Sequence Name  T27A3.2a.1
Length (nt)  2602   Chromosome Location  I: 6110134-6114549
Chromosome . Primary Identifier  I Chromosome Location . Start  6110134
Chromosome Location . End  6114549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020839 usp-5 T27A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A3.2a T27A3.2a 2370   I: 6110139-6110259

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.2a.1 6110134 6114549 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15056   126   I: 6110134-6110259 Caenorhabditis elegans
Exon15058   110   I: 6110317-6110426 Caenorhabditis elegans
Exon15060   74   I: 6110470-6110543 Caenorhabditis elegans
Exon15062   90   I: 6110587-6110676 Caenorhabditis elegans
Exon15064   303   I: 6110722-6111024 Caenorhabditis elegans
Exon15066   298   I: 6111122-6111419 Caenorhabditis elegans
Exon15068   272   I: 6111489-6111760 Caenorhabditis elegans
Exon15070   160   I: 6112342-6112501 Caenorhabditis elegans
Exon15073   93   I: 6112551-6112643 Caenorhabditis elegans
Exon15074   93   I: 6112701-6112793 Caenorhabditis elegans
Exon15076   261   I: 6112948-6113208 Caenorhabditis elegans
Exon15078   219   I: 6113252-6113470 Caenorhabditis elegans
Exon15080   189   I: 6113645-6113833 Caenorhabditis elegans
Exon15083   314   I: 6114236-6114549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.2a.1 6110134 6114549 1

1 Sequence

Length
2602

1 Sequence Ontology Term

Identifier Name Description
transcript