WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A12.9.1 Sequence Name  C27A12.9.1
Length (nt)  2804   Chromosome Location  I: 6061732-6068040
Chromosome . Primary Identifier  I Chromosome Location . Start  6061732
Chromosome Location . End  6068040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016159 pigo-1 C27A12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A12.9 C27A12.9 2652   I: 6061876-6062130

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27A12.9.1 6061732 6068040 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14912   399   I: 6061732-6062130 Caenorhabditis elegans
Exon14913   221   I: 6062175-6062395 Caenorhabditis elegans
Exon14914   125   I: 6062443-6062567 Caenorhabditis elegans
Exon14915   163   I: 6062630-6062792 Caenorhabditis elegans
Exon14916   129   I: 6062834-6062962 Caenorhabditis elegans
Exon14917   194   I: 6063273-6063466 Caenorhabditis elegans
Exon14918   124   I: 6063516-6063639 Caenorhabditis elegans
Exon14923   103   I: 6065288-6065390 Caenorhabditis elegans
Exon14924   108   I: 6065442-6065549 Caenorhabditis elegans
Exon14925   118   I: 6065609-6065726 Caenorhabditis elegans
Exon14926   90   I: 6065791-6065880 Caenorhabditis elegans
Exon14927   302   I: 6065995-6066296 Caenorhabditis elegans
Exon14928   125   I: 6066341-6066465 Caenorhabditis elegans
Exon14929   92   I: 6066807-6066898 Caenorhabditis elegans
Exon14930   140   I: 6067268-6067407 Caenorhabditis elegans
Exon14931   87   I: 6067495-6067581 Caenorhabditis elegans
Exon14932   105   I: 6067627-6067731 Caenorhabditis elegans
Exon14933   179   I: 6067862-6068040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27A12.9.1 6061732 6068040 -1

1 Sequence

Length
2804

1 Sequence Ontology Term

Identifier Name Description
transcript