WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A5.9.1 Sequence Name  C06A5.9.1
Length (nt)  1355   Chromosome Location  I: 6009782-6011586
Chromosome . Primary Identifier  I Chromosome Location . Start  6009782
Chromosome Location . End  6011586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004380 rnf-1 C06A5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A5.9 C06A5.9 1146   I: 6009875-6010039

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06A5.9.1 6009782 6011586 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14791   258   I: 6009782-6010039 Caenorhabditis elegans
Exon14792   102   I: 6010109-6010210 Caenorhabditis elegans
Exon14793   87   I: 6010257-6010343 Caenorhabditis elegans
Exon14794   84   I: 6010392-6010475 Caenorhabditis elegans
Exon14795   117   I: 6010523-6010639 Caenorhabditis elegans
Exon14796   143   I: 6010684-6010826 Caenorhabditis elegans
Exon14797   192   I: 6010877-6011068 Caenorhabditis elegans
Exon14798   175   I: 6011115-6011289 Caenorhabditis elegans
Exon14799   74   I: 6011338-6011411 Caenorhabditis elegans
Exon14800   123   I: 6011464-6011586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06A5.9.1 6009782 6011586 -1

1 Sequence

Length
1355

1 Sequence Ontology Term

Identifier Name Description
transcript