WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55F8.4 Sequence Name  F55F8.4
Length (nt)  1683   Chromosome Location  I: 5653916-5654640
Chromosome . Primary Identifier  I Chromosome Location . Start  5653916
Chromosome Location . End  5654640
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F8.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11194 CIR-1 65.8 560 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00074448
WBRNAi00048526
WBRNAi00072538
WBRNAi00072537
WBRNAi00032888
WBRNAi00110124
WBRNAi00108016
WBRNAi00110129
WBRNAi00110128
WBRNAi00081366
WBRNAi00087725
WBRNAi00110125
WBRNAi00110127
WBRNAi00116664
WBRNAi00074446
WBRNAi00074445
WBRNAi00074447
WBRNAi00000065
WBRNAi00072536
WBRNAi00074450
WBRNAi00074449
WBRNAi00074451
WBRNAi00000188
WBRNAi00001400
WBRNAi00108061
WBRNAi00025682
WBRNAi00025683
WBRNAi00111798
WBRNAi00110126
WBRNAi00117740

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55F8.4 5653916 5654640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018892 cir-1 F55F8.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55F8.4 5653916 5654640 -1
CDS:F55F8.4 5654767 5655267 -1
CDS:F55F8.4 5655317 5655606 -1
CDS:F55F8.4 5655654 5655820 -1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55F8.4.1 F55F8.4.1 1808   I: 5653828-5655857
Transcript:F55F8.4.2 F55F8.4.2 1795   I: 5653831-5655847