WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F11.9a.1 Sequence Name  F46F11.9a.1
Length (nt)  4099   Chromosome Location  I: 5610374-5616402
Chromosome . Primary Identifier  I Chromosome Location . Start  5610374
Chromosome Location . End  5616402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018512 trpp-8 F46F11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F11.9a F46F11.9a 3843   I: 5610608-5610658

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46F11.9a.1 5610374 5616402 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13581   285   I: 5610374-5610658 Caenorhabditis elegans
Exon13583   377   I: 5611195-5611571 Caenorhabditis elegans
Exon13586   1000   I: 5612463-5613462 Caenorhabditis elegans
Exon13588   812   I: 5613519-5614330 Caenorhabditis elegans
Exon13590   248   I: 5614437-5614684 Caenorhabditis elegans
Exon13592   395   I: 5614735-5615129 Caenorhabditis elegans
Exon13594   317   I: 5615268-5615584 Caenorhabditis elegans
Exon13596   208   I: 5615636-5615843 Caenorhabditis elegans
Exon13598   189   I: 5615888-5616076 Caenorhabditis elegans
Exon13600   268   I: 5616135-5616402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46F11.9a.1 5610374 5616402 -1

1 Sequence

Length
4099

1 Sequence Ontology Term

Identifier Name Description
transcript