WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01A10.2a.1 Sequence Name  M01A10.2a.1
Length (nt)  3824   Chromosome Location  I: 5546120-5561644
Chromosome . Primary Identifier  I Chromosome Location . Start  5546120
Chromosome Location . End  5561644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006594 tom-1 M01A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01A10.2a M01A10.2a 3375   I: 5546227-5546246

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M01A10.2a.1 5546120 5561644 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13205   127   I: 5546120-5546246 Caenorhabditis elegans
Exon13208   97   I: 5546300-5546396 Caenorhabditis elegans
Exon13214   240   I: 5546476-5546715 Caenorhabditis elegans
Exon13221   99   I: 5548095-5548193 Caenorhabditis elegans
Exon13227   77   I: 5548245-5548321 Caenorhabditis elegans
Exon13233   466   I: 5548378-5548843 Caenorhabditis elegans
Exon13239   237   I: 5548889-5549125 Caenorhabditis elegans
Exon13249   68   I: 5550822-5550889 Caenorhabditis elegans
Exon13255   157   I: 5550937-5551093 Caenorhabditis elegans
Exon13261   195   I: 5551213-5551407 Caenorhabditis elegans
Exon13268   111   I: 5551940-5552050 Caenorhabditis elegans
Exon13274   97   I: 5552098-5552194 Caenorhabditis elegans
Exon13280   143   I: 5552599-5552741 Caenorhabditis elegans
Exon13289   124   I: 5554741-5554864 Caenorhabditis elegans
Exon13292   153   I: 5555026-5555178 Caenorhabditis elegans
Exon13302   114   I: 5557669-5557782 Caenorhabditis elegans
Exon13312   146   I: 5559329-5559474 Caenorhabditis elegans
Exon13318   308   I: 5559768-5560075 Caenorhabditis elegans
Exon13325   64   I: 5560310-5560373 Caenorhabditis elegans
Exon13332   114   I: 5560525-5560638 Caenorhabditis elegans
Exon13339   61   I: 5560827-5560887 Caenorhabditis elegans
Exon13346   146   I: 5560934-5561079 Caenorhabditis elegans
Exon13358   480   I: 5561165-5561644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M01A10.2a.1 5546120 5561644 1

1 Sequence

Length
3824

1 Sequence Ontology Term

Identifier Name Description
transcript