WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01A10.2g.1 Sequence Name  M01A10.2g.1
Length (nt)  3934   Chromosome Location  I: 5546120-5561376
Chromosome . Primary Identifier  I Chromosome Location . Start  5546120
Chromosome Location . End  5561376 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006594 tom-1 M01A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01A10.2g M01A10.2g 3753   I: 5546227-5546246

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M01A10.2g.1 5546120 5561376 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13203   127   I: 5546120-5546246 Caenorhabditis elegans
Exon13211   97   I: 5546300-5546396 Caenorhabditis elegans
Exon13217   240   I: 5546476-5546715 Caenorhabditis elegans
Exon13224   99   I: 5548095-5548193 Caenorhabditis elegans
Exon13230   77   I: 5548245-5548321 Caenorhabditis elegans
Exon13236   466   I: 5548378-5548843 Caenorhabditis elegans
Exon13242   237   I: 5548889-5549125 Caenorhabditis elegans
Exon13252   68   I: 5550822-5550889 Caenorhabditis elegans
Exon13258   157   I: 5550937-5551093 Caenorhabditis elegans
Exon13264   195   I: 5551213-5551407 Caenorhabditis elegans
Exon13271   111   I: 5551940-5552050 Caenorhabditis elegans
Exon13277   97   I: 5552098-5552194 Caenorhabditis elegans
Exon13283   143   I: 5552599-5552741 Caenorhabditis elegans
Exon13286   490   I: 5552880-5553369 Caenorhabditis elegans
Exon13295   153   I: 5555026-5555178 Caenorhabditis elegans
Exon13305   114   I: 5557669-5557782 Caenorhabditis elegans
Exon13309   12   I: 5557960-5557971 Caenorhabditis elegans
Exon13315   146   I: 5559329-5559474 Caenorhabditis elegans
Exon13321   308   I: 5559768-5560075 Caenorhabditis elegans
Exon13329   64   I: 5560310-5560373 Caenorhabditis elegans
Exon13336   114   I: 5560525-5560638 Caenorhabditis elegans
Exon13343   61   I: 5560827-5560887 Caenorhabditis elegans
Exon13350   146   I: 5560934-5561079 Caenorhabditis elegans
Exon13354   212   I: 5561165-5561376 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M01A10.2g.1 5546120 5561376 1

1 Sequence

Length
3934

1 Sequence Ontology Term

Identifier Name Description
transcript