WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.9.1 Sequence Name  F59A3.9.1
Length (nt)  1724   Chromosome Location  I: 5530616-5534649
Chromosome . Primary Identifier  I Chromosome Location . Start  5530616
Chromosome Location . End  5534649 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019082 pup-3 F59A3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.9 F59A3.9 1449   I: 5530761-5531298

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F59A3.9.1 5530616 5534649 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13187   683   I: 5530616-5531298 Caenorhabditis elegans
Exon13188   193   I: 5531886-5532078 Caenorhabditis elegans
Exon13190   129   I: 5532131-5532259 Caenorhabditis elegans
Exon13192   109   I: 5532414-5532522 Caenorhabditis elegans
Exon13194   185   I: 5532893-5533077 Caenorhabditis elegans
Exon13196   100   I: 5533125-5533224 Caenorhabditis elegans
Exon13198   197   I: 5533516-5533712 Caenorhabditis elegans
Exon13200   128   I: 5534522-5534649 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F59A3.9.1 5530616 5534649 -1

1 Sequence

Length
1724

1 Sequence Ontology Term

Identifier Name Description
transcript