WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D4.1a.1 Sequence Name  C09D4.1a.1
Length (nt)  2377   Chromosome Location  I: 5497679-5505460
Chromosome . Primary Identifier  I Chromosome Location . Start  5497679
Chromosome Location . End  5505460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015632 C09D4.1 C09D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D4.1a C09D4.1a 1761   I: 5497917-5497961

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.1a.1 5497679 5505460 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12987   283   I: 5497679-5497961 Caenorhabditis elegans
Exon12989   147   I: 5498850-5498996 Caenorhabditis elegans
Exon12993   213   I: 5499170-5499382 Caenorhabditis elegans
Exon12996   149   I: 5499886-5500034 Caenorhabditis elegans
Exon13000   69   I: 5500085-5500153 Caenorhabditis elegans
Exon13004   98   I: 5501530-5501627 Caenorhabditis elegans
Exon13008   285   I: 5501673-5501957 Caenorhabditis elegans
Exon13012   141   I: 5502014-5502154 Caenorhabditis elegans
Exon13016   71   I: 5503058-5503128 Caenorhabditis elegans
Exon13020   212   I: 5503182-5503393 Caenorhabditis elegans
Exon13024   106   I: 5503504-5503609 Caenorhabditis elegans
Exon13028   112   I: 5504253-5504364 Caenorhabditis elegans
Exon13032   59   I: 5504920-5504978 Caenorhabditis elegans
Exon13039   432   I: 5505029-5505460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D4.1a.1 5497679 5505460 1

1 Sequence

Length
2377

1 Sequence Ontology Term

Identifier Name Description
transcript