WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D4.4a.1 Sequence Name  C09D4.4a.1
Length (nt)  3215   Chromosome Location  I: 5479488-5484661
Chromosome . Primary Identifier  I Chromosome Location . Start  5479488
Chromosome Location . End  5484661 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015635 C09D4.4 C09D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D4.4a C09D4.4a 2742   I: 5479943-5480019

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D4.4a.1 5479488 5484661 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12896   532   I: 5479488-5480019 Caenorhabditis elegans
Exon12899   122   I: 5480219-5480340 Caenorhabditis elegans
Exon12902   88   I: 5480720-5480807 Caenorhabditis elegans
Exon12905   134   I: 5480855-5480988 Caenorhabditis elegans
Exon12908   177   I: 5481043-5481219 Caenorhabditis elegans
Exon12911   238   I: 5481612-5481849 Caenorhabditis elegans
Exon12914   128   I: 5481893-5482020 Caenorhabditis elegans
Exon12917   191   I: 5482067-5482257 Caenorhabditis elegans
Exon12920   107   I: 5482313-5482419 Caenorhabditis elegans
Exon12923   184   I: 5482466-5482649 Caenorhabditis elegans
Exon12926   150   I: 5482697-5482846 Caenorhabditis elegans
Exon12929   73   I: 5482933-5483005 Caenorhabditis elegans
Exon12932   217   I: 5483058-5483274 Caenorhabditis elegans
Exon12935   156   I: 5483356-5483511 Caenorhabditis elegans
Exon12938   133   I: 5483559-5483691 Caenorhabditis elegans
Exon12941   211   I: 5483900-5484110 Caenorhabditis elegans
Exon12944   85   I: 5484160-5484244 Caenorhabditis elegans
Exon12947   101   I: 5484287-5484387 Caenorhabditis elegans
Exon12950   80   I: 5484434-5484513 Caenorhabditis elegans
Exon12955   108   I: 5484554-5484661 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D4.4a.1 5479488 5484661 -1

1 Sequence

Length
3215

1 Sequence Ontology Term

Identifier Name Description
transcript