WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C1.11a.1 Sequence Name  F27C1.11a.1
Length (nt)  3992   Chromosome Location  I: 5433906-5443026
Chromosome . Primary Identifier  I Chromosome Location . Start  5433906
Chromosome Location . End  5443026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017858 F27C1.11 F27C1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C1.11a F27C1.11a 3807   I: 5434091-5434181

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F27C1.11a.1 5433906 5443026 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12795   276   I: 5433906-5434181 Caenorhabditis elegans
Exon12796   68   I: 5434233-5434300 Caenorhabditis elegans
Exon12798   78   I: 5434344-5434421 Caenorhabditis elegans
Exon12803   134   I: 5435812-5435945 Caenorhabditis elegans
Exon12805   118   I: 5436136-5436253 Caenorhabditis elegans
Exon12807   87   I: 5436363-5436449 Caenorhabditis elegans
Exon12809   135   I: 5436492-5436626 Caenorhabditis elegans
Exon12811   92   I: 5436674-5436765 Caenorhabditis elegans
Exon12813   130   I: 5436815-5436944 Caenorhabditis elegans
Exon12815   101   I: 5437468-5437568 Caenorhabditis elegans
Exon12817   79   I: 5437618-5437696 Caenorhabditis elegans
Exon12819   170   I: 5437747-5437916 Caenorhabditis elegans
Exon12821   101   I: 5438098-5438198 Caenorhabditis elegans
Exon12823   208   I: 5438252-5438459 Caenorhabditis elegans
Exon12825   81   I: 5438506-5438586 Caenorhabditis elegans
Exon12827   210   I: 5438952-5439161 Caenorhabditis elegans
Exon12829   124   I: 5439209-5439332 Caenorhabditis elegans
Exon12831   119   I: 5439637-5439755 Caenorhabditis elegans
Exon12833   193   I: 5439813-5440005 Caenorhabditis elegans
Exon12835   366   I: 5440049-5440414 Caenorhabditis elegans
Exon12837   236   I: 5440478-5440713 Caenorhabditis elegans
Exon12839   128   I: 5440906-5441033 Caenorhabditis elegans
Exon12841   300   I: 5441082-5441381 Caenorhabditis elegans
Exon12843   73   I: 5441635-5441707 Caenorhabditis elegans
Exon12845   115   I: 5441769-5441883 Caenorhabditis elegans
Exon12847   81   I: 5442099-5442179 Caenorhabditis elegans
Exon12849   108   I: 5442312-5442419 Caenorhabditis elegans
Exon12851   81   I: 5442946-5443026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F27C1.11a.1 5433906 5443026 -1

1 Sequence

Length
3992

1 Sequence Ontology Term

Identifier Name Description
transcript