WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.3.2 Sequence Name  F55A12.3.2
Length (nt)  2550   Chromosome Location  I: 5358512-5365174
Chromosome . Primary Identifier  I Chromosome Location . Start  5358512
Chromosome Location . End  5365174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004087 ppk-1 F55A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.3 F55A12.3 1836   I: 5358525-5358579

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.3.2 5358512 5365174 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12483   68   I: 5358512-5358579 Caenorhabditis elegans
Exon12487   41   I: 5358629-5358669 Caenorhabditis elegans
Exon12490   205   I: 5358718-5358922 Caenorhabditis elegans
Exon12493   76   I: 5358975-5359050 Caenorhabditis elegans
Exon12496   118   I: 5359097-5359214 Caenorhabditis elegans
Exon12499   153   I: 5359268-5359420 Caenorhabditis elegans
Exon12502   565   I: 5359807-5360371 Caenorhabditis elegans
Exon12505   77   I: 5360427-5360503 Caenorhabditis elegans
Exon12508   85   I: 5360713-5360797 Caenorhabditis elegans
Exon12511   255   I: 5363016-5363270 Caenorhabditis elegans
Exon12514   104   I: 5363890-5363993 Caenorhabditis elegans
Exon12517   299   I: 5364046-5364344 Caenorhabditis elegans
Exon12520   504   I: 5364671-5365174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.3.2 5358512 5365174 1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
transcript