WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.4a.1 Sequence Name  F55A12.4a.1
Length (nt)  1204   Chromosome Location  I: 5354181-5357029
Chromosome . Primary Identifier  I Chromosome Location . Start  5354181
Chromosome Location . End  5357029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.4a F55A12.4a 1107   I: 5354181-5354238

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A12.4a.1 5354181 5357029 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12457   58   I: 5354181-5354238 Caenorhabditis elegans
Exon12458   180   I: 5354351-5354530 Caenorhabditis elegans
Exon12460   74   I: 5354581-5354654 Caenorhabditis elegans
Exon12462   142   I: 5355019-5355160 Caenorhabditis elegans
Exon12464   154   I: 5355478-5355631 Caenorhabditis elegans
Exon12467   196   I: 5355684-5355879 Caenorhabditis elegans
Exon12470   76   I: 5356104-5356179 Caenorhabditis elegans
Exon12474   136   I: 5356650-5356785 Caenorhabditis elegans
Exon12479   188   I: 5356842-5357029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A12.4a.1 5354181 5357029 1

1 Sequence

Length
1204

1 Sequence Ontology Term

Identifier Name Description
transcript