WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C1.1a.1 Sequence Name  F48C1.1a.1
Length (nt)  3270   Chromosome Location  I: 5325556-5330219
Chromosome . Primary Identifier  I Chromosome Location . Start  5325556
Chromosome Location . End  5330219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018594 aman-3 F48C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C1.1a F48C1.1a 3141   I: 5325566-5325685

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48C1.1a.1 5325556 5330219 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12354   130   I: 5325556-5325685 Caenorhabditis elegans
Exon12355   156   I: 5325739-5325894 Caenorhabditis elegans
Exon12357   118   I: 5325943-5326060 Caenorhabditis elegans
Exon12359   169   I: 5326111-5326279 Caenorhabditis elegans
Exon12361   128   I: 5326416-5326543 Caenorhabditis elegans
Exon12363   78   I: 5326596-5326673 Caenorhabditis elegans
Exon12365   274   I: 5326718-5326991 Caenorhabditis elegans
Exon12367   87   I: 5327097-5327183 Caenorhabditis elegans
Exon12369   90   I: 5327226-5327315 Caenorhabditis elegans
Exon12371   178   I: 5327405-5327582 Caenorhabditis elegans
Exon12373   139   I: 5327629-5327767 Caenorhabditis elegans
Exon12375   329   I: 5327861-5328189 Caenorhabditis elegans
Exon12377   128   I: 5328259-5328386 Caenorhabditis elegans
Exon12379   91   I: 5328430-5328520 Caenorhabditis elegans
Exon12381   111   I: 5328569-5328679 Caenorhabditis elegans
Exon12383   106   I: 5328725-5328830 Caenorhabditis elegans
Exon12385   220   I: 5328873-5329092 Caenorhabditis elegans
Exon12387   460   I: 5329405-5329864 Caenorhabditis elegans
Exon12389   278   I: 5329942-5330219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48C1.1a.1 5325556 5330219 1

1 Sequence

Length
3270

1 Sequence Ontology Term

Identifier Name Description
transcript