WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C1.1b.1 Sequence Name  F48C1.1b.1
Length (nt)  3277   Chromosome Location  I: 5325549-5330222
Chromosome . Primary Identifier  I Chromosome Location . Start  5325549
Chromosome Location . End  5330222 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018594 aman-3 F48C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C1.1b F48C1.1b 3138   I: 5325566-5325685

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C1.1b.1 5325549 5330222 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12353   137   I: 5325549-5325685 Caenorhabditis elegans
Exon12356   156   I: 5325739-5325894 Caenorhabditis elegans
Exon12358   118   I: 5325943-5326060 Caenorhabditis elegans
Exon12360   169   I: 5326111-5326279 Caenorhabditis elegans
Exon12362   128   I: 5326416-5326543 Caenorhabditis elegans
Exon12364   78   I: 5326596-5326673 Caenorhabditis elegans
Exon12366   274   I: 5326718-5326991 Caenorhabditis elegans
Exon12368   87   I: 5327097-5327183 Caenorhabditis elegans
Exon12370   90   I: 5327226-5327315 Caenorhabditis elegans
Exon12372   178   I: 5327405-5327582 Caenorhabditis elegans
Exon12374   139   I: 5327629-5327767 Caenorhabditis elegans
Exon12376   329   I: 5327861-5328189 Caenorhabditis elegans
Exon12378   128   I: 5328259-5328386 Caenorhabditis elegans
Exon12380   88   I: 5328433-5328520 Caenorhabditis elegans
Exon12382   111   I: 5328569-5328679 Caenorhabditis elegans
Exon12384   106   I: 5328725-5328830 Caenorhabditis elegans
Exon12386   220   I: 5328873-5329092 Caenorhabditis elegans
Exon12388   460   I: 5329405-5329864 Caenorhabditis elegans
Exon12390   281   I: 5329942-5330222 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C1.1b.1 5325549 5330222 1

1 Sequence

Length
3277

1 Sequence Ontology Term

Identifier Name Description
transcript