WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C1.6.1 Sequence Name  F48C1.6.1
Length (nt)  881   Chromosome Location  I: 5318220-5319301
Chromosome . Primary Identifier  I Chromosome Location . Start  5318220
Chromosome Location . End  5319301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018599 F48C1.6 F48C1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C1.6 F48C1.6 738   I: 5318333-5318587

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C1.6.1 5318220 5319301 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12343   368   I: 5318220-5318587 Caenorhabditis elegans
Exon12344   114   I: 5318650-5318763 Caenorhabditis elegans
Exon12345   82   I: 5318807-5318888 Caenorhabditis elegans
Exon12346   131   I: 5318938-5319068 Caenorhabditis elegans
Exon12347   186   I: 5319116-5319301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C1.6.1 5318220 5319301 -1

1 Sequence

Length
881

1 Sequence Ontology Term

Identifier Name Description
transcript