WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A3.3b.1 Sequence Name  F56A3.3b.1
Length (nt)  4779   Chromosome Location  I: 5176830-5182653
Chromosome . Primary Identifier  I Chromosome Location . Start  5176830
Chromosome Location . End  5182653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003792 npp-6 F56A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A3.3b F56A3.3b 4578   I: 5176836-5176917

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A3.3b.1 5176830 5182653 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11940   88   I: 5176830-5176917 Caenorhabditis elegans
Exon11945   305   I: 5176972-5177276 Caenorhabditis elegans
Exon11948   126   I: 5177325-5177450 Caenorhabditis elegans
Exon11951   644   I: 5177501-5178144 Caenorhabditis elegans
Exon11954   331   I: 5178203-5178533 Caenorhabditis elegans
Exon11957   188   I: 5178579-5178766 Caenorhabditis elegans
Exon11960   292   I: 5178825-5179116 Caenorhabditis elegans
Exon11963   324   I: 5179529-5179852 Caenorhabditis elegans
Exon11965   128   I: 5179897-5180024 Caenorhabditis elegans
Exon11970   887   I: 5180071-5180957 Caenorhabditis elegans
Exon11973   135   I: 5181003-5181137 Caenorhabditis elegans
Exon11976   349   I: 5181180-5181528 Caenorhabditis elegans
Exon11979   147   I: 5181574-5181720 Caenorhabditis elegans
Exon11982   304   I: 5181768-5182071 Caenorhabditis elegans
Exon11985   531   I: 5182123-5182653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A3.3b.1 5176830 5182653 1

1 Sequence

Length
4779

1 Sequence Ontology Term

Identifier Name Description
transcript