WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A3.4.2 Sequence Name  F56A3.4.2
Length (nt)  4003   Chromosome Location  I: 5171275-5175708
Chromosome . Primary Identifier  I Chromosome Location . Start  5171275
Chromosome Location . End  5175708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A3.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004955 spd-5 F56A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A3.4 F56A3.4 3597   I: 5171494-5171589

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56A3.4.2 5171275 5175708 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11919   315   I: 5171275-5171589 Caenorhabditis elegans
Exon11922   332   I: 5171641-5171972 Caenorhabditis elegans
Exon11924   251   I: 5172023-5172273 Caenorhabditis elegans
Exon11926   886   I: 5172323-5173208 Caenorhabditis elegans
Exon11928   214   I: 5173252-5173465 Caenorhabditis elegans
Exon11930   398   I: 5173514-5173911 Caenorhabditis elegans
Exon11932   82   I: 5173957-5174038 Caenorhabditis elegans
Exon11934   1098   I: 5174086-5175183 Caenorhabditis elegans
Exon11936   188   I: 5175231-5175418 Caenorhabditis elegans
Exon11938   239   I: 5175470-5175708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56A3.4.2 5171275 5175708 -1

1 Sequence

Length
4003

1 Sequence Ontology Term

Identifier Name Description
transcript