WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.7.1 Sequence Name  F54C1.7.1
Length (nt)  674   Chromosome Location  I: 5018783-5020086
Chromosome . Primary Identifier  I Chromosome Location . Start  5018783
Chromosome Location . End  5020086 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003934 pat-10 F54C1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.7 F54C1.7 486   I: 5019003-5019170

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54C1.7.1 5018783 5020086 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11361   144   I: 5018783-5018926 Caenorhabditis elegans
Exon11367   189   I: 5018982-5019170 Caenorhabditis elegans
Exon11372   156   I: 5019221-5019376 Caenorhabditis elegans
Exon11378   107   I: 5019784-5019890 Caenorhabditis elegans
Exon11384   52   I: 5019941-5019992 Caenorhabditis elegans
Exon11390   26   I: 5020061-5020086 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54C1.7.1 5018783 5020086 -1

1 Sequence

Length
674

1 Sequence Ontology Term

Identifier Name Description
transcript