WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.1.1 Sequence Name  F54C1.1.1
Length (nt)  2019   Chromosome Location  I: 5008770-5013624
Chromosome . Primary Identifier  I Chromosome Location . Start  5008770
Chromosome Location . End  5013624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018789 F54C1.1 F54C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.1 F54C1.1 1746   I: 5008793-5008900

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54C1.1.1 5008770 5013624 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11345   131   I: 5008770-5008900 Caenorhabditis elegans
Exon11346   133   I: 5009721-5009853 Caenorhabditis elegans
Exon11347   103   I: 5010385-5010487 Caenorhabditis elegans
Exon11348   109   I: 5010552-5010660 Caenorhabditis elegans
Exon11349   127   I: 5011036-5011162 Caenorhabditis elegans
Exon11350   137   I: 5011233-5011369 Caenorhabditis elegans
Exon11351   119   I: 5011558-5011676 Caenorhabditis elegans
Exon11352   690   I: 5012130-5012819 Caenorhabditis elegans
Exon11353   470   I: 5013155-5013624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54C1.1.1 5008770 5013624 1

1 Sequence

Length
2019

1 Sequence Ontology Term

Identifier Name Description
transcript