WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.3a.2 Sequence Name  F54C1.3a.2
Length (nt)  2727   Chromosome Location  I: 4996839-5003156
Chromosome . Primary Identifier  I Chromosome Location . Start  4996839
Chromosome Location . End  5003156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003221 mes-3 F54C1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.3a F54C1.3a 2265   I: 4996844-4996895

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.3a.2 4996839 5003156 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11287   57   I: 4996839-4996895 Caenorhabditis elegans
Exon11290   219   I: 4997517-4997735 Caenorhabditis elegans
Exon11293   164   I: 4997796-4997959 Caenorhabditis elegans
Exon11296   85   I: 4998011-4998095 Caenorhabditis elegans
Exon11299   252   I: 4998642-4998893 Caenorhabditis elegans
Exon11302   145   I: 4998941-4999085 Caenorhabditis elegans
Exon11305   127   I: 4999393-4999519 Caenorhabditis elegans
Exon11308   119   I: 4999572-4999690 Caenorhabditis elegans
Exon11311   57   I: 4999790-4999846 Caenorhabditis elegans
Exon11313   115   I: 5000237-5000351 Caenorhabditis elegans
Exon11316   287   I: 5000401-5000687 Caenorhabditis elegans
Exon11319   124   I: 5000734-5000857 Caenorhabditis elegans
Exon11322   260   I: 5001555-5001814 Caenorhabditis elegans
Exon11325   64   I: 5001862-5001925 Caenorhabditis elegans
Exon11327   285   I: 5002156-5002440 Caenorhabditis elegans
Exon11330   367   I: 5002790-5003156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.3a.2 4996839 5003156 1

1 Sequence

Length
2727

1 Sequence Ontology Term

Identifier Name Description
transcript