WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.3b.1 Sequence Name  F54C1.3b.1
Length (nt)  3028   Chromosome Location  I: 4996835-5003161
Chromosome . Primary Identifier  I Chromosome Location . Start  4996835
Chromosome Location . End  5003161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003221 mes-3 F54C1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.3b F54C1.3b 2208   I: 4996844-4996895

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.3b.1 4996835 5003161 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11286   61   I: 4996835-4996895 Caenorhabditis elegans
Exon11291   219   I: 4997517-4997735 Caenorhabditis elegans
Exon11294   164   I: 4997796-4997959 Caenorhabditis elegans
Exon11297   85   I: 4998011-4998095 Caenorhabditis elegans
Exon11300   252   I: 4998642-4998893 Caenorhabditis elegans
Exon11303   145   I: 4998941-4999085 Caenorhabditis elegans
Exon11306   127   I: 4999393-4999519 Caenorhabditis elegans
Exon11309   119   I: 4999572-4999690 Caenorhabditis elegans
Exon11314   115   I: 5000237-5000351 Caenorhabditis elegans
Exon11317   287   I: 5000401-5000687 Caenorhabditis elegans
Exon11320   124   I: 5000734-5000857 Caenorhabditis elegans
Exon11323   260   I: 5001555-5001814 Caenorhabditis elegans
Exon11326   64   I: 5001862-5001925 Caenorhabditis elegans
Exon11328   1006   I: 5002156-5003161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.3b.1 4996835 5003161 1

1 Sequence

Length
3028

1 Sequence Ontology Term

Identifier Name Description
transcript