WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C1.5b Sequence Name  F54C1.5b
Length (nt)  1794   Chromosome Location  I: 4989700-4990020
Chromosome . Primary Identifier  I Chromosome Location . Start  4989700
Chromosome Location . End  4990020
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33109 DYF-1, isoform b 68.5 597 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048247
WBRNAi00003766
WBRNAi00032747

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F54C1.5b 4989700 4990020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F54C1.5b 4989700 4990020 -1
CDS:F54C1.5b 4990079 4990273 -1
CDS:F54C1.5b 4990318 4990453 -1
CDS:F54C1.5b 4990756 4991045 -1
CDS:F54C1.5b 4991089 4991277 -1
CDS:F54C1.5b 4991574 4991653 -1
CDS:F54C1.5b 4991700 4991828 -1
CDS:F54C1.5b 4991875 4991983 -1
CDS:F54C1.5b 4992538 4992600 -1
CDS:F54C1.5b 4992649 4992801 -1
CDS:F54C1.5b 4993324 4993452 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C1.5b.4 F54C1.5b.4 2095   I: 4989556-4994625
Transcript:F54C1.5b.1 F54C1.5b.1 1990   I: 4989558-4993506
Transcript:F54C1.5b.2 F54C1.5b.2 3128   I: 4989558-4994644
Transcript:F54C1.5b.3 F54C1.5b.3 2256   I: 4989700-4994638